Package: sampbias 2.0.0
sampbias: Evaluating Geographic Sampling Bias in Biological Collections
Evaluating the biasing impact of geographic features such as airports, cities, roads, rivers in datasets of coordinates based biological collection datasets, by Bayesian estimation of the parameters of a Poisson process. Enables also spatial visualization of sampling bias and includes a set of convenience functions for publication level plotting. Also available as shiny app.
Authors:
sampbias_2.0.0.tar.gz
sampbias_2.0.0.zip(r-4.5)sampbias_2.0.0.zip(r-4.4)sampbias_2.0.0.zip(r-4.3)
sampbias_2.0.0.tgz(r-4.4-any)sampbias_2.0.0.tgz(r-4.3-any)
sampbias_2.0.0.tar.gz(r-4.5-noble)sampbias_2.0.0.tar.gz(r-4.4-noble)
sampbias_2.0.0.tgz(r-4.4-emscripten)sampbias_2.0.0.tgz(r-4.3-emscripten)
sampbias.pdf |sampbias.html✨
sampbias/json (API)
NEWS
| # Install 'sampbias' in R: |
| install.packages('sampbias', repos = c('https://azizka.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/azizka/sampbias/issues
- area_example - Example Dataset for a Custom Study Area
- borneo - Borneo
- ea_raster - Equal Area Raster
- ecoregion_example - Detailed Example for a Custom Study Area
Last updated 10 months agofrom:d4f7610c05. Checks:ERROR: 1 WARNING: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | FAIL | Nov 06 2024 |
| R-4.5-win | WARNING | Nov 06 2024 |
| R-4.5-linux | WARNING | Nov 06 2024 |
| R-4.4-win | WARNING | Nov 06 2024 |
| R-4.4-mac | WARNING | Nov 06 2024 |
| R-4.3-win | WARNING | Nov 06 2024 |
| R-4.3-mac | WARNING | Nov 06 2024 |
Exports:calculate_biasdis_rastmap_biasproject_bias
Dependencies:askpassclassclassIntclicolorspacecowplotcpp11curlDBIdplyre1071fansifarverforcatsgenericsggplot2gluegridExtragtablehttrisobandjsonliteKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixmgcvmimemunsellnlmeopensslpillarpkgconfigproxypurrrR6RColorBrewerRcpprlangrnaturalearths2scalessfstringistringrsysterratibbletidyrtidyselectunitsutf8vctrsviridisviridisLitewithrwk
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Example Dataset for a Custom Study Area | area_example |
| Borneo | borneo |
| Evaluating Sampling Bias in Species Distribution Data | calculate_bias |
| Distance Rasters from a List of Geographic Gazetteers | dis_rast |
| Equal Area Raster | ea_raster |
| Detailed Example for a Custom Study Area | ecoregion_example |
| Is Method for Class sampbias | is.sampbias |
| Mapping Projected Bias Effects | map_bias |
| Plotting the Posterior Estimates of the Bias Weights | plot.sampbias |
| Projecting Bias Effects in Space | project_bias |
| Summary Method for Class sampbias | summary.sampbias |
